Hi all, I am trying to merge two microarrays datasets, as in this paper. I did not understand how to do it because the datasets do not share the same samples' names set.. I did not find any field that can relate one dataset to each other.. any hint on how to do it?

The two datasets are this and this.

Thanks

added answer*

haw can we integrate GSE with different GPL?

I am also interested in integrating GSE with different GPL (GPL96 vs. GPL3921) , did you find any solution for your problem?