This question is already answered on a different forum as a quick google search revealed me those, and there are multiple solutions to this.
what you need is to do following in Global.asax code behind in Applicationo_Start:
protected void Application_Start(object sender, EventArgs e)
{
string JQueryVer = "1.7.1";
ScriptManager.ScriptResourceMapping.AddDefinition("jquery", new ScriptResourceDefinition
{
Path = "~/Scripts/jquery-" + JQueryVer + ".min.js",
DebugPath = "~/Scripts/jquery-" + JQueryVer + ".js",
CdnPath = "http://ajax.aspnetcdn.com/ajax/jQuery/jquery-" + JQueryVer + ".min.js",
CdnDebugPath = "http://ajax.aspnetcdn.com/ajax/jQuery/jquery-" + JQueryVer + ".js",
CdnSupportsSecureConnection = true,
LoadSuccessExpression = "window.jQuery"
});
}
You may want to read more details
here