Can't be sure it's what you want, since I don't know your intention.
However, by default it's not visible when started using automation features.
The following works for me from excel VBA. No PPT window is shown, the file is created, the application doesn't remain in the task manager.
Sub CreatePptFileInBkg()
Dim ppt As Object
Dim curPres As Object
Set ppt = CreateObject("PowerPoint.Application")
Set curPres = ppt.Presentations.Add
curPres.SaveAs FileName:="c:\PPTSample1.pptx"
ppt.Quit
End Sub